Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908886.1_cds_XP_016459112.1_52672
CDS Infomation

[gene=LOC107782695] [db_xref=GeneID:107782695] [protein=protein phosphatase 2C 16-like isoform X2] [protein_id=XP_016459112.1] [location=join(8781..9377,9479..9796,9878..9983,11308..11642)] [gbkey=CDS]
Sequence

ATGTCGCTTGATGTGATTTCTGAAAATGAAAGCAACTGGATTGCTGGTGATGATGATTCC
TTTTCATTGGAAGGTGATCAGATTCTTGATAGTTCGTGTTCCTTGTCAGTGGTGAGCGAT
TGTAGTAGTATATGCGCTGATGATTTTATATGTTTTGAGATAGCGTCTGATATAGAAGGT
CAGGATTTCGTAGATTCTCAGAAAATCATCAGCCATGTCGAACTTATTGCTAAGACTGAG
GTTCTAGCTGAGTCAGATGTTGAGGATACTGTGACTAGACTCGTGGAAGCTTCCAATGGA
CTTGAAGAGCAGATCTCAAAATCATCTGAAGTTGTAGTTCAGCTACCCCTAGATAAAGGC
TTGAGTGCAACAGTCAGCCGAAGTGTTTTTGAAGTGGACTACATACCCCTATGGGGATAT
ACATCCATCTGTGGAAGGAGACCAGAAATGGAAGATGCATTTGCAACTGTTCCTAGATTC
TTGAAAATTCCTCTACAGATGCTAATTGGTGATCGCGCGTTTGATGGACAGCCTAGTCGC
TTAAGTCATTTGACGACTCATTTCTTTGGAGTTTATGATGGCCATGGTGGTTCTCAGGTG
GCAAATTACTGCCGAGACCGGATGCATGCTGTTTTGATTGAGGAGTTGGAAACTATTATG
ACAAATCTCAGTGATGAAAGTATGAGGCAAAGTTGCCAAGAGCACTGGAGAAAAGCATTT
ACCAACTGTTTTCTTAAAGTTGATGCTGAGATTGGAGGGGGAGATAGTCATGAGCCTGTT
GCCCCAGAAACTGTAGGCTCCACAGCGGTTGTTGCCATTGTTTGTTCATCTCACATTATA
GTGTCAAACAGTGGCGATTCAAGGGCTGTTCTGTGTCGTGGGAAGGAACCCTTGGCATTG
TCAGTGGATCACAAACCAAACCGAGAAGATGAATATGAAAGGATTGAAGCAGCTGGAGGC
AAGGTGATACAGTGGAATGGCCATCGTGTTTTTGGTGTTCTTGCAATGTCTAGGTCCATC
GGAGATAGATACTTGAAGCCTTGGATTATTCCTGATCCAGAAGTAACGTTCATACCTCGA
GCCAAGGATGACGAATGCCTTATTCTTGCGAGTGATGGTTTATGGGATGTCATGACAAAT
GAAGAAGTTTGTGATATGGCTCGTAAACGCATACTTATGTGGCATAAAAAGAACGGTGTA
ACGCTCCCCATGGAAAGGGGCGAAGGAATTGATCCAGCAGCACAGGCTGCAGCAGAGTGC
TTGTCGAATCGAGCTCTTCAAAAGGGCAGCAAGGACAACATAACTGTGATTGTGGTGGAC
TTGAAAGCCCAAAGAAAGTTTAAGAGCAAAACCTAA

Peptide Sequence

PEP ID

XP_016459112.1
PEP Infomation

PREDICTED: protein phosphatase 2C 16-like isoform X2 [Nicotiana tabacum]
Sequence

MSLDVISENESNWIAGDDDSFSLEGDQILDSSCSLSVVSDCSSICADDFICFEIASDIEG
QDFVDSQKIISHVELIAKTEVLAESDVEDTVTRLVEASNGLEEQISKSSEVVVQLPLDKG
LSATVSRSVFEVDYIPLWGYTSICGRRPEMEDAFATVPRFLKIPLQMLIGDRAFDGQPSR
LSHLTTHFFGVYDGHGGSQVANYCRDRMHAVLIEELETIMTNLSDESMRQSCQEHWRKAF
TNCFLKVDAEIGGGDSHEPVAPETVGSTAVVAIVCSSHIIVSNSGDSRAVLCRGKEPLAL
SVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFIPR
AKDDECLILASDGLWDVMTNEEVCDMARKRILMWHKKNGVTLPMERGEGIDPAAQAAAEC
LSNRALQKGSKDNITVIVVDLKAQRKFKSKT

Transcript Sequence

Gene sequence data has not been registered.